Review Article | Volume: 13, Issue: 6, June, 2023

Microbial adaptations at higher altitude for sustainable development: A review

Manali Singh,  Kuldeep Jayant,  Dipti Singh,  Deep Chandra Suyal,  Abhirup Mitra,  Shivani Bhutani   

Manali Singh1, Kuldeep Jayant2, Dipti Singh3, Deep Chandra Suyal4, Abhirup Mitra5, Shivani Bhutani1

1Department of Biotechnology, Invertis University, Bareilly, Uttar Pradesh.

2Department of Agricultural and Food Engineering, IIT Kharagpur, Kharagpur, West Bengal.

3Department of Biochemistry, C.B.S.H, G.B Pant University of Agriculture and Technology, Pantnagar, Uttarakhand.

4Department of Microbiology, Akal College of Basic Sciences, Eternal University, Baru Sahib, Himachal Pradesh.

5Department of Agriculture, Invertis University, Bareilly, Uttar Pradesh.

Open Access   

Published:  Jun 04, 2023

DOI: 10.7324/JAPS.19-1646044973
PDF [ 1.2 MB]
Request Permission
Share
Download Citation
Print
Download PDF
Abstract

The phyllospheric microbiome and rhizosphere, as well as microbial diversity inhabiting harsh environmental conditions, are studied extensively in the hilly regions. Difficult topography, poor infrastructure, and fragile ecosystems characterize hill agroecosystems. Thus, determining the precise process that determines biodiversity becomes extremely challenging. Plant-microbial interactions may explain why plants evolve to survive. Plant-microbial interactions may be a factor for plants’ adaptation approach to survive. Thus, plant–microbe interactions are extremely valuable since they are responsible for practically all biological transformations and the generation of consistent and balanced sources of nitrogen, carbon, and other nutrients that aid in the subsequent growth of plant communities. As a result, it aids in nutrient acquisition and accumulation. These plant-microbial interactions also aid in bioremediation and land restoration. As a result, the first processes of soil formation and nutrient input are dependent on the activity of plant–microbe interactions. Those bacteria that can endure the extremely cold climate at higher altitudes are critical for plant development. To survive in harsh environmental circumstances, microorganisms evolved in a variety of environments. As a result, it is critical to discover the powerful microorganisms and the mechanisms that allow them to live under extreme temperature circumstances. Later, similar ideas can be applied by farmers in field experiments for long-term agricultural production in the world’s coldest and harshest regions. This paper includes a brief examination of potential plant–microbe interactions as well as adaptive methods employed by plants and microbial biodiversity living in hilly locations.


Keyword:     Microbes adaptation psychrophiles extreme environment PGPR

Citation:

Singh M, Jayant K, Singh D, Suyal DC, Mitra A, Bhutani S. Microbial adaptations at higher altitude for sustainable development: A review. J Appl Pharm Sci, 2023; 13(06):001-009. doi: https://doi.org/10.7324/JAPS.19-1646044973

Copyright: © The Author(s). This is an open-access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
HTML Full Text

Reference

Arora NK. Plant microbe symbiosis: fundamentals and advances. Springer, New Delhi, India, 2013.https://doi.org/10.1007/978-81-322-1287-4

Arunkumar K, Singh RD, Patra AK, Sahu SK. Probing of microbial community structure, dehydrogenase and soil carbon in-relation to di_erent land uses in soils of Ranichauri (Garhwal Himalayas). Int J Curr Microbiol App Sci, 2013; 2:325-38.

Bisht SC, Mishra PK, Joshi GK. Genetic and functional diversity among root-associated psychrotrophic Pseudomonad's isolated from the Himalayan plants. Arch Microbiol, 2013l 195:605-15.https://doi.org/10.1007/s00203-013-0908-4

Bossis E, Lemanceau P, Latour X, Gardan L. The taxonomy of Pseudomonas fluorescens and Pseudomonas putida: current status and need for revision. Agronomie, 2000; 20:51-63.https://doi.org/10.1051/agro:2000112

Capkova K, Hauer T, Rehakova K, Dolezal J. Some like it high! phylogenetic diversity of high-elevation cyanobacterial community from biological soil crusts of western Himalaya. Microb Ecol, 2016; 71:113-23.https://doi.org/10.1007/s00248-015-0694-4

Chattopadhyay MK. Mechanism of bacterial adaptation to low temperature. J Biosci, 2006; 31:157-65.https://doi.org/10.1007/BF02705244

Chen Z, Feng D, Zhang B, Wang Q, Luo Y, Dong X. Proteomic insights into the temperature responses of a cold-adaptive archaeon Methanolobus psychrophilus R15. Extremophiles, 2015; 19:249-59.https://doi.org/10.1007/s00792-014-0709-y

Chintalapati S, Kiran MD, Shivaji S. Role of membrane lipid fatty acids in cold adaptation. Cell Mol Biol, 2004; 50:631-42.

D'Amico S, Claverie P, Collins T, Georlette D, Gratia E, Hoyoux A, Meuwis MA, Feller G, Gerday C. Molecular basis of cold adaptation. Phil Trans R Soc Lond B, 2002; 357:917-25.https://doi.org/10.1098/rstb.2002.1105

De León KB, Gerlach R, Peyton BM, Fields MW. Archaeal and bacterial communities in three alkaline hot springs in Heart Lake Geyser Basin, Yellowstone National Park. Front Microbiol, 2013; 4:330.https://doi.org/10.3389/fmicb.2013.00330

Dixon R, Kahn D. Genetic regulation of biological nitrogen fixation. Nat Rev Microbiol, 2004; 2(8):621-31.https://doi.org/10.1038/nrmicro954

Dong X, Chen Z. Psychrotolerant methanogenic archaea: diversity and cold adaptation mechanisms. Sci China Life Sci, 2012; 55(5):415-21.https://doi.org/10.1007/s11427-012-4320-0

Gaba S, Singh RN, Abrol S, Yadav AN, Saxena AK, Kaushik R. Draft genome sequence of Halolamina pelagica CDK2 isolated from natural salterns from Rann of Kutch, Gujarat, India. Genome Announc, 2017; 5(6):1-2.https://doi.org/10.1128/genomeA.01593-16

Gerday C, Aittaleb M, Bentahier M, Chessa JP, Claverie P, Collins T, D'Amico S, Dumont J, Garsoux G, Georlette D, Hoyoux A, Lonhienne T, Meuwis MA, Feller G. Cold-adapted enzymes: from fundamentals to biotechnology. Trends Biotechnol, 2000; 18:103-7.https://doi.org/10.1016/S0167-7799(99)01413-4

Golubiewsk N, McGinley M. Species influences upon ecosystem function. In: Cleveland CJ (ed.). Encyclopedia of earth. Environmental Information Coalition, National Council for Science and the Environment, Washington, DC, 2010.

Hamdan A. Psychrophiles: ecological significance and potential industrial application. South Afr J Sci, 2018; 114:5-6.https://doi.org/10.17159/sajs.2018/20170254

Howard DH. Acquisition, transport and storage of iron by pathogenic fungi. Clin Microbiol Rev, 1999; 12:394-404.https://doi.org/10.1128/CMR.12.3.394

Joshi P, Bhatt AB. Diversity and function of plant growth promoting rhizobacteria associated with wheat rhizosphere in North Himalayan Region. Int J Environ Sci, 2010; 1:1135-43.

Kammerlander B, Breiner HW, Filker S, Sommaruga R, Sonntag B, Stoeck T. High diversity of protistan plankton communities in remote high mountain lakes in the European Alps and the Himalayan mountains. FEMS Microbiol Ecol, 2015; 91:fiv010.https://doi.org/10.1093/femsec/fiv010

Kawahara H. The structures and functions of ice crystal controlling proteins from bacteria. J Biosci Bioeng, 2002; 94:492-6.https://doi.org/10.1016/S1389-1723(02)80185-2

King AJ, Karki D, Nagy L, Racoviteanu A, Schmidt, SK. Microbial biomass and activity in high elevation (>5,100 m) soils from the Annapurna and Sagarmatha regions of the Nepalese Himalayas. Himalayan J Sci, 2010; 6:11-8.https://doi.org/10.3126/hjs.v6i8.2303

Kottmier ST, Sullivan CW. Bacterial biomass and production in pack ice of Antarctica marginal ice age zones. Deep-Sea Res, 1990; 37:1311-30.https://doi.org/10.1016/0198-0149(90)90045-W

Kumar S, Suyal DC, Yadav A, Shouche Y, Goel R. Microbial diversity and soil physiochemical characteristic of higher altitude. PLoS One, 2019; 14:e0213844.https://doi.org/10.1371/journal.pone.0213844

Lee RE, Warren GJ, Gusta LV. Biochemistry of bacterial ice nuclei. In: Ray F, Paul WK (eds.). Biological ice nucleation and its application, APS Press, St Paul, MI, pp 63-83, 1995.

Liu Y, Yao T, Jiao N, Tian L, Hu A, Yu W, Li S. Microbial diversity in the snow, a moraine lake and a stream in Himalayan glacier. Extremophiles, 2011; 15:411-21.https://doi.org/10.1007/s00792-011-0372-5

Lyngwi NA, Koijam K, Sharma D, Joshi SR. Cultivable bacterial diversity along the altitudinal zonation and vegetation range of tropical Eastern Himalaya. Rev Biol Trop, 2013; 61:467-90.https://doi.org/10.15517/rbt.v61i1.11141

Mahato NK, Sharma A, Singh Y, Lal R. Comparative metagenomic analyses of a high-altitude Himalayan geothermal spring revealed temperature-constrained habitat-specific microbial community and metabolic dynamics. Arch Microbiol, 2019; 201:377-88.https://doi.org/10.1007/s00203-018-01616-6

Mishra PK, Joshi P, Bisht SC, Bisht JK, Selvakumar G. Cold-tolerant agriculturally important microorganisms. In: Mageswari DK (ed.). Plant growth and health promoting bacteria. Microbiology Monographs V.18. Springer-Verlag, Berlin, Germany, pp 273-96, 2011.https://doi.org/10.1007/978-3-642-13612-2_12

Moon CD, Zhang XX, Matthijs S, Schäfer M, Budzikiewicz H, Rainey PB. Genomic, genetic and structural analysis of pyoverdine-mediated iron acquisition in the plant growth-promoting bacterium Pseudomonas fluorescens SBW25. BMC Microbiol, 2008; 8:7.https://doi.org/10.1186/1471-2180-8-7

Neilands JD. Siderophores: structure and function of microbial iron transport compounds. J Biol Chem, 1995; 270:26723-6.https://doi.org/10.1074/jbc.270.45.26723

Olson JC, Nottingham PM. Temperature in microbial ecology of foods volume 1: factors affecting life and death of microorganisms. International Commission on Microbiological specifications for foods, Academic Press, London, UK, pp 1-37, 1980.

Patten CL, Glick BR. Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Appl Environ Microbiol, 2002; 68:3795-801.https://doi.org/10.1128/AEM.68.8.3795-3801.2002

Raymond JA, DeVries AL. Adsorption inhibition as a mechanism of freezing resistance in polar fishes. Proc Natl Acad Sci USA, 1977; 74:2589-93.https://doi.org/10.1073/pnas.74.6.2589

Rinu K, Pandey A. Slow and steady phosphate solubilization by a psychrotolerant strain of Paecilomyces hepiali (MTCC 9621). World J Microbiol Biotechnol, 2011; 27:1055-62.https://doi.org/10.1007/s11274-010-0550-0

Tayung K, Barik BP, Jha DK, Deka DC. Identification and characterization of antimicrobial metabolite from an endophytic fungus, Fusarium solani isolated from bark of Himalayan yew. Mycosphere, 2011; 2:203-13.

Samie N, Noghabi K, Gharegozloo Z, Zahiri H, Ahmadian G, Sharafi H, Behrozi R, Vali H. Psychrophilic α-amylase from Aeromonas veronii NS07 isolated from farm soils. Process Biochem, 2012; 47:1381-7.https://doi.org/10.1016/j.procbio.2012.05.007

Sanyal A, Antony R, Samui G, Thamban M. Microbial communities and their potential for degradation of dissolved organic carbon in cryoconite hole environments of Himalaya and Antarctica. Microbiol Res, 2018; 208:32-42.https://doi.org/10.1016/j.micres.2018.01.004

Schmidt S, Lynchi, R, King A, Karki D, Robeson MS, Nagy L, Williams MW, Mitter MS, Freeman KR. Phylogeography of microbial phototrophs in the dry valleys of the high Himalayas and Antarctic. Proc Roy Soc B Biol Sci, 2011; 278:702-8.https://doi.org/10.1098/rspb.2010.1254

Selvakumar G, Kundu S, Joshi P, Gupta AD, Nazim S, Mishra PK, Gupta HS. Characterization of a cold-tolerant plant growth-promoting bacterium Pantoea dispersa 1A isolated from a sub-alpine soil in the North Western Indian Himalayas. World J Microbiol Biotechnol, 2008; 24:955-60.https://doi.org/10.1007/s11274-007-9558-5

Selvakumar G, Joshi P, Nazim S, Mishra P, Bisht J, Gupta H. Phosphate solubilization and growth promotion by Pseudomonas fragi CS11RH1 (MTCC 8984), a psychrotolerant bacterium isolated from a high altitude Himalayan rhizosphere. Biologia, 2009; 64(2):239-45; doi:10.2478/ s11756-009-0041-7https://doi.org/10.2478/s11756-009-0041-7

Sharma A, Pandey A, Shouche YS, Kumar B, Kulkarni G. Research paper characterization and identification of Geobacillus spp. isolated from soldhar hot spring site of Garhwal Himalaya. India J Basic Microbiol, 2009; 49:187-94.https://doi.org/10.1002/jobm.200800194

Sharma S, Khan FG, Qazi GN. Molecular cloning and characterization of amylase from soil metagenomic library derived from Northwestern Himalayas. Appl Microbiol Biotechnol, 2010; 86:1821-8.https://doi.org/10.1007/s00253-009-2404-y

Shrivastava N, Nandi I, Ibeyaima A, Gupta S, Sarethy IP. Microbial diversity of a Himalayan forest and characterization of rare actinomycetes for antimicrobial compounds. 3 Biotech, 2019; 9:27.https://doi.org/10.1007/s13205-018-1556-9

Shivaji S, Prakash J. How do bacteria sense and respond to low temperature? Arch Microbiol, 2010; 192:85-95.https://doi.org/10.1007/s00203-009-0539-y

Singh M, Shah P, Punetha H, Gaur AK, Kumar A, Agrawal S. Isolation and quantification of a potent anti cancerous compound, Withaferin a from the aerial parts of Withania somnifera (Ashwagandha). Ad Plant Sci, 2017; 30(ll):231-5.

Singh M, Shah P, Punetha H, Agrawal S. Varietal comparison of withanolide contents in different tissues of Withania somnifera (l.) Dunal (Ashwagandha). Int J Life-Sci Sci Res, 2018; 4(3):1752-8.https://doi.org/10.21276/ijlssr.2018.4.3.3

Singh N, Iqbal Z, Ansari TA, Khan MA, Ali N, Khan A, Singh M. The portent plant with a purpose: Aloe vera. J Pharma Phytochem, 2019; 8(3):4124-30.

Singh M, Poddar NK, Singh D, Agrawal S. Foliar application of elicitors enhanced the yield of withanolide contents in Withania somnifera (L.) Dunal (variety, Poshita), 3Biotech, 2020; 10(4):1-8.https://doi.org/10.1007/s13205-020-2153-2

Verma P, Yadav AN, Kazy SK, Saxena AK, Suman A. Evaluating the diversity and phylogeny of plant growth promoting bacteria associated with wheat (Triticum aestivum) growing in central zone of India. Int J Curr Microbiol App Sci, 2014; 3(5):432-47.

Verma P, Yadav AN, Kumar V, Singh DP, Saxena AK. Beneficial plant-microbes interactions: biodiversity of microbes from diverse extreme environments and its impact for crops improvement. In: Singh D, Singh H, Prabha R (eds.). Plant-microbe interactions in agro-ecological perspectives. Springer, Singapore, 2017.https://doi.org/10.1007/978-981-10-6593-4_22

Vyas P, Joshi R, Sharma K, Rahi P. Cold-adapted and rhizosphere-competent strain of Rahnella sp. with broad-spectrum plant growth-promotion potential. J Microbiol Biotechnol, 2010; 20(12):1724-34.

Yadav AN, Sachan SG, Verma P, Saxena AK. Prospecting cold deserts of north western Himalayas for microbial diversity and plant growth promoting attributes. J Biosci Bioeng, 2015; 119:683-93; doi:10.1016/j. jbiosc.2014.11.006https://doi.org/10.1016/j.jbiosc.2014.11.006

Yadav AN, Sachan SG, Verma P, Kaushik R, Saxena AK. Cold active hydrolytic enzymes production by psychrotrophic Bacilli isolated from three sub-glacial lakes of NW Indian Himalayas. J Basic Microbiol, 2016; 56(3):294-307. Yadav AN, Verma P, Bhanumati Singh B, Chauahan VC, Suman A, Saxena AK. Plant growth promoting bacteria: biodiversity and multifunctional attributes for sustainable agriculture. Adv Biotech Micro, 2017; 5(5):555671.https://doi.org/10.1002/jobm.201500230

Yadav AN, Verma P, Sachan SG, Kaushik R, Saxena AK. Psychrotrophic microbiomes: molecular diversity and beneficial role in plant growth promotion and soil health. In: Panpatte DG, et al. (eds.). Microorganisms for green revolution, microorganisms for sustainability 7, Springer, Singapore, 2018 ; doi:10.1007/978-981-10-7146-1_11.https://doi.org/10.1007/978-981-10-7146-1_11

Yadvinder S, Gulati A, Singh DP, Khattar JIS. Cyanobacterial community structure in hot water springs of Indian NorthWestern Himalayas: a morphological, molecular and ecological approach. Algal Res, 2018; 29:179-92.https://doi.org/10.1016/j.algal.2017.11.023

Zaidi A, Khan MS, Ahemad M, Oves M, Wani PA. Recent advances in plant growth promotion by phosphate-solubilizing microbes. In: Khan MS, et al. (eds.). Microbial strategies for crop improvement, Springer, Berlin, Germany, pp 23-50, 2009.https://doi.org/10.1007/978-3-642-01979-1_2

Article Metrics
542 Views 292 Downloads 834 Total

Year

Month

Related Search

By author names